PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.7G040100.2.p
Common NamePRUPE_ppa018670mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 247aa    MW: 28161.8 Da    PI: 7.706
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.7G040100.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.11.6e-1374125155
                         CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         ++ +hn+ Er RR++iN  ++ Lr+llP +   + kKls   +  ++v+Y+ +Lq
  Prupe.7G040100.2.p  74 KKLNHNASERDRRQKINRLYSSLRSLLPAD---QMKKLSIPNTISRVVKYVPELQ 125
                         6789**************************...9*****************9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474597.2E-1468138IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.68173124IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.87E-1074129No hitNo description
PfamPF000109.7E-1174125IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.8E-1174128IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.2E-779130IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    Send to blast
MLALSPPSFS TTGWPLEDSK SHDQNYFYRD SFTDQIAESF LRILPSQLPQ VEPARSTPST  60
TASGEYSGVS TMVKKLNHNA SERDRRQKIN RLYSSLRSLL PADQMKKLSI PNTISRVVKY  120
VPELQKQVEG LIRKREELLV RISKQEDQEL HEEKKMKSTA GSSLSAVSTY RLNDREVAIQ  180
ISTLKTHNNL LSEILLNLEE EGLQILNASS FESSGERVFY NLHLQVERSY RLECENLSEK  240
LMSFYA*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1132156RKREELLVRISKQEDQELHEEKKMK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008244842.11e-164PREDICTED: transcription factor ORG2-like
TrEMBLM5VS791e-163M5VS79_PRUPE; Uncharacterized protein
TrEMBLM5WEE61e-163M5WEE6_PRUPE; Uncharacterized protein
STRINGVIT_08s0007g05300.t015e-95(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.11e-59bHLH family protein